Publications of 2013

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BibTeX source
Daniel Faria, Catia Pesquita, Emanuel Santos, Matteo Palmonari, Isabel F Cruz, Francisco M Couto, The agreementmakerlight ontology matching system.On the Move to Meaningful Internet Systems: OTM 2013 Conferences p. 527--541, 2013. Springer.

BibTeX source
Catia Pesquita, Daniel Faria, Emanuel Santos, Francisco M Couto, To repair or not to repair: reconciling correctness and coherence in ontology reference alignments.Ontology Matching Workshop at ISWC 2013 p. 13, 2013.

DOI | | BibTeX source
Marques, AF, Rosset, C., Rasinmaki, J., Vacik, H., Gordon, S., Nobre, S., Andre Falcao, Weber, D., Granitzer, M., Eriksson, LO 2013: Collaborative development of a semantic wiki on forest management decision support. Scandinavian Journal of Forest Research (), 1-14.

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D. Faria, C. Pesquita, E. Santos, M. Palmonari, I. Cruz, Francisco Couto, The AgreementMakerLight Ontology Matching System.The 12th International Conference on Ontologies, DataBases, and Applications of Semantics (ODBASE) 2013.

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S. Moreira, D. Batista, P. Carvalho, Francisco Couto, M. Silva 2013: Tracking Politics with POWER. Program: electronic library and information systems.

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C. Machado, A. Freitas, Francisco Couto 2013: Enrichment analysis applied to disease prognosis. Journal of Biomedical Semantics.

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Francisco Couto, H. Pinto 2013: The Next Generation of Similarity Measures that fully explore the Semantics in Biomedical Ontologies. Journal of Bioinformatics and Computational Biology.

BibTeX source
C. Machado, D. Rebholz-Schuhmann, A. Freitas, Francisco Couto 2013: The semantic web in translational medicine: current applications and future directions. Briefings in Bioinformatics, Oxford Univ Press.

BibTeX source
Maria Beatriz Carmo, Ana Paula Cláudio, António Ferreira, Ana Paula Afonso, Raúl Simplício, Improving Symbol Salience in Augmented Reality..GRAPP/IVAPP 2013: Proceedings of the International Conference on Computer Graphics Theory and Applications and International Conference on Information Visualization Theory and Applications. p. 367-372, 2013.

BibTeX source
Paulo Pombinho, Ana Paula Afonso, Maria Beatriz Carmo, Understanding the Role of Historical Context in a Point of Interest Recommendation System..GRAPP/IVAPP 2013: Proceedings of the International Conference on Computer Graphics Theory and Applications and International Conference on Information Visualization Theory and Applications. p. 537-541, 2013.

BibTeX source
Catia Pesquita, Daniel Faria, Cosmin Stroe, Emanuel Santos, Isabel F Cruz, Francisco M Couto, What's in a 'nym'? Synonyms in Biomedical Ontology Matching.International Semantic Web Conference p. 526-541, 2013. Springer Berlin Heidelberg.

Document | BibTeX source
Andre Lamurias, Tiago Grego, Francisco Couto, Chemical compound and drug name recognition using CRFs and semantic similarity based on ChEBI.Proceedings of the fourth BioCreative challenge evaluation workshop 2013.

Poster | Presentation | BibTeX source
Miguel Costa, João Miranda, David Cruz, Daniel Gomes, Query Suggestion for Web Archive Search.Proceedings of the 10th International Conference on Preservation of Digital Objects Lisbon, Portugal, 2013.

DOI | | Document | BibTeX source
Hugo Bastos, Luka A. Clarke, Francisco M. Couto 2013: Annotation extension through protein family annotation coherence metrics. Frontiers in Genetics.

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Ana L. Teixeira, Andre O. Falcao 2013: Noncontiguous atom matching structural similarity function. Journal of Chemical Information and Modeling 10(53), 2511-2524.

Document | BibTeX source
João D Ferreira, Janna Hastings, Francisco M Couto 2013: Exploiting disjointness axioms to improve semantic similarity measures. Oxford Bioinformatics (), btt491.

Document | BibTeX source
João D. Ferreira, Catia Pesquita, Francisco M. Couto, Mário J. Silva, Digital preservation of epidemic resources: coupling metadata and ontologies.Proceedings of the 10th International Conference on Preservation of Digital Objects 2013.

Document | BibTeX source
João Zamite, João D. Ferreira, Paulo Graça, Carlos Santos, Tiago Posse, Cátia Pesquita, Dulce Domingos, Francisco Couto, Mário J. Silva, D3.6 - Report: Final Specification of the Epidemic Marketplace Platform and Evaluation Results Technical Report. Technical Report . FCUL, July 2013.

BibTeX source
Tiago Goncalves, Ana Paula Afonso, Bruno Martins, Daniel Gonçalves, ST-TrajVis: Interacting with Trajectory Data.Proceedings of the 2013 British Computer Society Conference on Human-Computer Interaction, BCS HCI 2013. 2013.

BibTeX source
João Zamite, Dulce Domingos, Mário J. Silva, Carlos Santos, Group-Based Discretionary Access Control for Epidemiological Resources.HCist 2013 - International Conference on Health and Social Care Information Systems and Technologies Procedia Technology October, 2013. Elsevier.

BibTeX source
Tiago Goncalves, Ana Paula Afonso, Maria Beatriz Carmo, Paulo Pombinho, Comparison of Off-screen Visualization Techniques with Representation of Relevance on Mobile Devices.Proceedings of the 2013 British Computer Society Conference on Human-Computer Interaction, BCS HCI 2013 2013.

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Ana L. Teixeira, João P. Leal, Andre O Falcao, Improving QSPR models for predicting standard enthalpy of formation with a hybrid approach for feature selection (as a poster).CQB - Day 2013 p. 70, Faculdade de Ciências da Universidade de Lisboa, Portugal, July, 2013.

Poster | BibTeX source
Carlos Santos, Dulce Domingos, João Zamite , Paulo Graça, Mário J. Silva, Access Control for Shared Epidemic Datasets. Turin, Italy. Poster @ Epiwork International Workshop "Digital Epidemiology". 2013

Poster | BibTeX source
Catia Pesquita, João D. Ferreira, Francisco M. Couto, Mário J. Silva, Semi-Automated Annotation of Epidemiological Resources. Turin, Italy. Poster @ Epiwork International Workshop "Digital Epidemiology". 2013

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Tiago Grego, Francisco Pinto, Francisco Couto, LASIGE: using Conditional Random Fields and ChEBI ontology.Proceedings of the International Workshop on Semantic Evaluation (SemEval2013) 2013.

Document | Presentation | BibTeX source
Daniel Gomes, David Cruz, João Miranda, Miguel Costa, Simão Fontes, Search the Past with the Portuguese Web Archive.Proceedings of the Demos Track of the 22nd International World Wide Web Conference Rio de Janeiro, Brazil, 2013.

Document | Presentation | BibTeX source
Miguel Costa, Daniel Gomes, Francisco M Couto, Mário J. Silva, A Survey of Web Archive Search Architectures.Proceedings of the 3rd Temporal Web Analytics Workshop Rio de Janeiro, Brazil, 2013.

Document | Presentation | BibTeX source
Daniel Gomes, Miguel Costa, David Cruz, João Miranda, Simão Fontes, Creating a Billion-Scale Searchable Web Archive.Proceedings of the 3rd Temporal Web Analytics Workshop Rio de Janeiro, Brazil, May, 2013.

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Tiago Grego, Francisco Couto 2013: Enhancement of Chemical Entity Identification in Text Using Semantic Similarity Validation. PLOS ONE 5(8), e62984.

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Ana L. Teixeira, João P. Leal, Andre O. Falcao, Automated Identification and Classification of Stereochemistry: Chirality and Double Bond Stereoisomerism Technical Report. Technical Report . LaSIGE, Department of Informatics, Faculty of Sciences, University of Lisbon, February 2013.


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