Francisco Couto

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* [http://www.di.fc.ul.pt/~fjmc Home Page]
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* [http://www.di.fc.ul.pt/~fjmc Official Home Page]
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* Research interests:  
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* '''Research interests:'''
** BioInformatics, Text Mining, Data Mining, Information Systems, Biomedical Ontologies
** BioInformatics, Text Mining, Data Mining, Information Systems, Biomedical Ontologies
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=== Ongoing Projects ===  
=== Ongoing Projects ===  
* [[Biomedical Informatics]] research line co-coordinator
* [[Biomedical Informatics]] research line co-coordinator
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* [[BOA]], [[ARN]], [[ThermInfo]], [[FiBRE]], [[Grease]], [[CIDS]], [[EPIWork]]
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* [[BOA]], [[ARN]], [[ThermInfo]], [[FiBRE]], [[Grease]], [[cids|CIDS]], [[EPIWork]]
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=== Past Projects ===
=== Past Projects ===
* [[ReBIL]]
* [[ReBIL]]
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** [http://www.bioalma.com/ BioAlma], Madrid, Spain
** [http://www.bioalma.com/ BioAlma], Madrid, Spain
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=== Current Students ===
=== Current Students ===
==== Doctoral ====
==== Doctoral ====
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* [[Tiago Grego]], [[Catia Pesquita]], [[Hugo Bastos]], [[Catia Machado]]
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* [[Tiago Grego]], [[Catia Pesquita]], [[Hugo Bastos]]
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==== Master ====
==== Master ====
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* [[Daniel Amoedo]], [[Bruno Tavares]], [[Ivan Andrade]], [[João Ferreira]], [[Bibek Behera]]  
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* [[Catia Machado]], [[Ana Teixeira]], [[Daniel Amoedo]]
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=== Past Students ===
=== Past Students ===
==== Master ====
==== Master ====
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* [[Daniel Santos]], [[Ana Teixeira]]
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* [[Daniel Santos]]
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=== Prizes ===
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* [http://www.ordemengenheiros.pt/Default.aspx?tabid=1570 Young Engineer Innovation Prize 2004] from the [http://www.ordemengenheiros.pt/ Portuguese Engineers Guild].
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=== Publications ===
=== Publications ===

Revision as of 11:00, 25 January 2010

Image:Photo.jpg
  • Official Home Page
  • Research interests:
    • BioInformatics, Text Mining, Data Mining, Information Systems, Biomedical Ontologies

Contents

Ongoing Projects

Past Projects

Current Students

Doctoral

Master

Past Students

Master


Publications

Program Committee

Conferences

  • ACM Symposium on Applied Computing (SAC), bioinformatics track, since 2004
  • National Conference on XML: Aplicacoes e Tecnologias Associadas (XATA), since 2007
  • International Conference on Intelligent Systems for Molecular Biology and European Conference on Computational Biology (ISMB/ECCB), since 2009
  • ACM Conference on Information and Knowledge Management (CIKM), since 2008

Workshops

  • High Performance Computing Applied to Medical Data and Bioinformatics (HPC-Bio), since 2007
  • Workshop on Mining and Management of Biological Data (MMBD), since 2007
  • Workshop on Computational Methods in Bioinformatics and Systems Biology (EPIA), since 2007
  • Workshop for PhD Students in Information and Knowledge Management, since 2008

Manuscript Reviewer

Journals

  • BMC Bioinformatics, BioCreative special issue, 2004, 2007
  • IEEE Transactions on Knowledge and Data Engineering, mining biological data special issue, 2004
  • BMC Bioinformatics, 2006
  • EURASIP Journal on Bioinformatics and Systems Biology, 2007
  • Bioinformatics, Oxford, since 2006
  • Information Sciences, Elsevier, 2008

Books

  • Advanced Data Mining Technologies in Bioinformatics, 2005
  • Information Retrieval in Biomedicine: Natural Language Processing for Knowledge Integration, 2008
Personal tools
Research Lines
Internal Information