Francisco Couto

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'''Francisco M Couto'''
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* [http://www.di.fc.ul.pt/~fjmc Official Home Page]
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* '''Research interests:'''
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Assistant Professor, [http://www.ul.pt/ Universidade de Lisboa], Faculdade de Ciências
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** Biomedical Informatics
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** Bioinformatics
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[[ReBIL | PhD]], [http://www.ul.pt/ Universidade de Lisboa], 2006
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** Text Mining and Data Mining
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** Information Systems
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[http://homepages.di.fc.ul.pt/~fjmc/ircfs/ Master], [http://www.ist.utl.pt/ Instituto Superior Técnico], 2001
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** Ontologies
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Informatics and Computer Engineering, [http://www.ist.utl.pt/ Instituto Superior Técnico], 2000
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== Contact ==
 
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'''Universidade de Lisboa'''
 
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Faculdade de Ciências
 
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Departamento de Informática
 
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Campo Grande
 
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1749-016 Lisboa
 
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Portugal
 
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'''E-mail:''' [mailto:fcouto@di.fc.ul.pt fcouto@di.fc.ul.pt]
 
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'''Telephone:''' +351 217500253 (ext.26383)
 
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'''Fax:''' +351 217500084
 
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'''Office:''' 6.3.36
 
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== Research ==
 
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=== Research interests ===
 
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* BioInformatics, Text Mining, Data Mining, Information Systems, Biomedical Ontologies.
 
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=== Ongoing Projects ===
 
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* [[Biomedical Informatics]] research line co-coordinator
 
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* [[BOA]], [[ARN]], [[ThermInfo]], [[FiBRE]], [[Grease]], [[CIDS]], [[EPIWork]]
 
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=== Past Projects ===
 
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* [[ReBIL]]
 
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* Invited researcher at:
 
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** [http://www.afmb.univ-mrs.fr/ AFMB-CNRS], Marseille, France
 
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** [http://www.ebi.ac.uk/ EBI], Hinxton, UK
 
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** [http://www.bioalma.com/ BioAlma], Madrid, Spain
 
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=== Current Students ===
 
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==== Doctoral ====
 
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* [[Tiago Grego]], [[Catia Pesquita]], [[Hugo Bastos]]
 
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==== Master ====
 
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* [[Catia Machado]], [[Ana Teixeira]], [[Daniel Amoedo]], [[Bruno Tavares]], [[Ivan Andrade]]
 
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=== Past Students ===
 
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==== Master ====
 
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* [[Daniel Santos]]
 
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=== Prizes ===
 
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* [http://www.ordemengenheiros.pt/Default.aspx?tabid=1570 Young Engineer Innovation Prize 2004] from the [http://www.ordemengenheiros.pt/ Portuguese Engineers Guild].
 
=== Publications ===
=== Publications ===
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* [[Publications of Francisco M Couto | All Publications]]
* [[Publications of Francisco M Couto | All Publications]]
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* [[List of Publications of Francisco M Couto | Publications at December, 2008]]
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* Selected publications at [http://www.di.fc.ul.pt/~fjmc/ Official Home Page]
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* [http://cids.di.fc.ul.pt/results?acc=5054131061095190198&format=html Citation Analysis]
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=== Program Committee ===
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==== Conferences ====
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* ACM Symposium on Applied Computing (SAC), bioinformatics track, since 2004
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* National Conference on XML: Aplicacoes e Tecnologias Associadas (XATA), since 2007
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* International Conference on Intelligent Systems for Molecular Biology and European Conference on Computational Biology (ISMB/ECCB),  since 2009
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* ACM Conference on Information and Knowledge Management (CIKM), since 2008
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==== Workshops ====
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* High Performance Computing Applied to Medical Data and Bioinformatics (HPC-Bio), since 2007
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* Workshop on Mining and Management of Biological Data (MMBD), since 2007
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* Workshop on Computational Methods in Bioinformatics and Systems Biology (EPIA), since 2007
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* Workshop for PhD Students in Information and Knowledge Management, since 2008
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=== Manuscript Reviewer ===
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==== Journals ====
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* BMC Bioinformatics, BioCreative special issue, 2004, 2007
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* IEEE Transactions on Knowledge and Data Engineering, mining biological data special issue, 2004
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* BMC Bioinformatics, 2006
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* EURASIP Journal on Bioinformatics and Systems Biology, 2007
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* Bioinformatics, Oxford, since 2006
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* Information Sciences, Elsevier, 2008
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==== Books ====
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* Advanced Data Mining Technologies in Bioinformatics, 2005
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* Information Retrieval in Biomedicine: Natural Language Processing for Knowledge Integration, 2008
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Current revision as of 15:11, 3 January 2014

Image:Photo.jpg
  • Official Home Page
  • Research interests:
    • Biomedical Informatics
    • Bioinformatics
    • Text Mining and Data Mining
    • Information Systems
    • Ontologies

Publications

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Research Lines
Internal Information