Tiago Grego

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Name: Tiago Grego
E-mail: tgrego@fc.ul.pt
Address: Campo Grande, FCUL
Edifício C6, Piso 3, Sala 30
1749-016 Lisboa, Portugal
Projects: FiBRE, BOA
Web Tools: ICE, CMPSim, CIDS
Research interests: Bioinformatics, Text Mining, Machine Learning, Information Systems, Ontologies

Publications

Document | BibTeX source
Andre Lamurias, Tiago Grego, Francisco Couto, Chemical compound and drug name recognition using CRFs and semantic similarity based on ChEBI.Proceedings of the fourth BioCreative challenge evaluation workshop 2013.

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Tiago Grego, Francisco Pinto, Francisco Couto, LASIGE: using Conditional Random Fields and ChEBI ontology.Proceedings of the International Workshop on Semantic Evaluation (SemEval2013) 2013.

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Tiago Grego, Francisco Couto 2013: Enhancement of Chemical Entity Identification in Text Using Semantic Similarity Validation. PLOS ONE 5(8), e62984.

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Tiago Grego, Francisco Pinto, Francisco Couto, Identifying Chemical Entities based on ChEBI.Proceedings of ICBO 2012.

Document | BibTeX source
Tiago Grego, Catia Pesquita, Hugo Bastos, Francisco M. Couto 2012: Chemical Entity Recognition and Resolution to ChEBI. ISRN Bioinformatics (2012), 9.

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Bruno Tavares, Hugo Bastos, Daniel Faria, Joao D. Ferreira, Tiago Grego, Catia Pesquita, Francisco Couto, The Biomedical Ontology Applications (BOA) framework.Proceedings of ICBO 2011.

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Tiago Grego, João D. Ferreira, Catia Pesquita, Hugo Bastos, Diogo Vila Viçosa, João Freire, Francisco Couto, Chemical and Metabolic Pathway Semantic Similarity Technical Report. TR 2010-01. University of Lisbon, Faculty of Sciences, LASIGE, March 2010.

Document | BibTeX source
Hugo Bastos, Tiago Grego, Francisco Couto, Pedro M. Coutinho, Enzyme family coherence assessment: validation and prediction.JB'2009 - Challenges in Bioinformatics p. 26-30, Lisbon, Portugal, November, 2009.

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Tiago Grego, Piotr Pezik, Francisco Couto, Dietrich Rebholz-Schuhmann 2009: Identification of Chemical Entities in Patent Documents. Lecture Notes in Computer Science (5518), 942-949.

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Francisco Couto, Catia Pesquita, Tiago Grego, Paulo Verissimo 2009: Handling self-citations using Google Scholar. Cybermetrics: International Journal of Scientometrics, Informetrics and Bibliometrics.

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Catia Pesquita, Tiago Grego, Francisco Couto 2009: Identifying Gene Ontology Areas for Automated Enrichment. Lecture Notes in Computer Science (5518), 934-941.

DOI | Document | Presentation | BibTeX source
Francisco Couto, Tiago Grego, Catia Pesquita, Hugo Bastos, R. Torres, P. Sanchez, L. Pascual, C. Blaschke, Identifying Bioentity Recognition Errors of Rule-Based Text-Mining Systems.IEEE Third International Conference on Digital Information Management (ICDIM) 2008.

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Catia Pesquita, Daniel Faria, Tiago Grego, Francisco Couto, Mário J. Silva: Untangling BioOntologies for Mining Biomedical Information. in: Handbook of Research on Text and Web Mining Technologies. Idea Group Inc. 2008.

Document | BibTeX source
Francisco Couto, Tiago Grego, Rafael Torres, Pablo Sanchez, Leandro Pascual, Christian Blaschke, Filtering Bioentity Recognition Errors in Bioliterature using a Case-based Approach.BioLINK SIG at 15th International Conference on Intelligent Systems for Molecular Biology / 6th European Conference on Computational Biology (ISMB/ECCB) July, 2007.


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